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Intron Name: Anas_platyrhynchos_platyrhynchos_8_13005581_13006443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

13005581 - 13006443

Intron Length:

863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CAAATATTGTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CCATTCTCAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.08

0.7

85.2

32.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

61.2

0.25

1.1

58.6

45.8

Minor 5ss

36.3

-1.6

3.3

48.7

47.5

Minor BPS

52.3

0.15

1.7

65.81

44.6

Associated Gene:

Gene:

BRINP3

Ensembl Gene ID:

ENSAPLG00000014479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037871

13005054 - 13200368

195315