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Intron Name: Anas_platyrhynchos_platyrhynchos_8_13006532_13019772_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

13006532 - 13019772

Intron Length:

13241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

GTATTTTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

GCTTATCTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

72.1

40.1

Major BPS

85.7

0.89

0.8

22.2

Major PPT

72.6

0.51

45.1

Minor 5ss

44.8

-0.6

2.9

68.2

42.5

Minor BPS

0.11

1.8

70.17

Associated Gene:

Gene:

BRINP3

Ensembl Gene ID:

ENSAPLG00000014479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037871

13005054 - 13200368

195315