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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1301918_1303604_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1301918 - 1303604

Intron Length:

1687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTACTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

GTTGTCTCATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

40.1

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

64.5

0.33

1.1

64.7

35.4

Minor 5ss

28.4

-2.5

3.5

47.6

Minor BPS

49.9

0.08

1.9

72.47

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029990

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039296

1296960 - 1304535

7576