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Intron Name: Anas_platyrhynchos_platyrhynchos_8_13148930_13152118_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13148930 - 13152118

Intron Length:

3189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GGTTTAATAACA

Flanking Amino Acid:

QSPENKIQLQGLQVILPEYL

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

74.4

41.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

83.6

0.76

0.8

81.3

30.7

Minor 5ss

41.2

-1

2.5

51.1

45.4

Minor BPS

51.8

0.05

1.9

67.25

38.2

Associated Gene:

Gene:

BRINP3

Ensembl Gene ID:

ENSAPLG00000014479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037871

13005054 - 13200368

195315

ENSAPLT00000033303

13005054 - 13200368

195315

ENSAPLT00000025610

13005054 - 13200368

195315

ENSAPLT00000015094

13019773 - 13200596

180824