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Intron Name: Anas_platyrhynchos_platyrhynchos_8_13152356_13165020_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13152356 - 13165020

Intron Length:

12665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGATGT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TAAATTTTACCT

Flanking Amino Acid:

NAYNSEFEESDEFKLFMKRL

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

0.9

70.3

36.4

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

34.4

-1.8

3.2

44.3

45.4

Minor BPS

54.6

0.22

1.6

70.15

40.8

Associated Gene:

Gene:

BRINP3

Ensembl Gene ID:

ENSAPLG00000014479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015094

13019773 - 13200596

180824

ENSAPLT00000037871

13005054 - 13200368

195315

ENSAPLT00000033303

13005054 - 13200368

195315

ENSAPLT00000025610

13005054 - 13200368

195315