Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_1318414_1318745_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1318414 - 1318745

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TATGGTCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATCAC

U12 Branch Point Sequence:

TATCACAAAATT

Flanking Amino Acid:

REIRLMFHKLYPRWYPARQS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

85.2

25.5

Major BPS

69.5

0.49

71.8

33.3

Major PPT

76.9

0.61

69.1

41.6

Minor 5ss

36.3

-1.6

2.9

46.9

41.8

Minor BPS

46.4

-0.1

68.97

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007886

1316304 - 1330178

13875