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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1332556_1333119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1332556 - 1333119

Intron Length:

564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

CTTTCCTCACAC

Flanking Amino Acid:

YSVSQTTLDQVFVNFAKQQM

Intron Amino Acid Position:

1900

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

77.8

0.62

0.8

30.8

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

52.3

0.05

67.84

43.5

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414

ENSAPLT00000021728

1332433 - 1381846

49414