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Intron Name: Anas_platyrhynchos_platyrhynchos_8_13331286_13331913_F

Intron Information:

Intron Rank:

133942

Intron Class:

major

Intron Phase:

Intron Coordinates:

13331286 - 13331913

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATGTGTC

5'SS Class:

major

3'SS Sequence:

TCTTTCCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

CTTTCCTTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

74.3

34.2

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

89.6

0.89

0.6

84.1

24.1

Minor 5ss

45.8

-0.4

3.1

65.2

39.7

Minor BPS

0.24

1.9

68.4

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017796

13325295 - 13332189

6895