Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_1333805_1333889_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1333805 - 1333889

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAGC

5'SS Class:

major

3'SS Sequence:

TCTGTTCTGAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCAAAT

U12 Branch Point Sequence:

TTTAGCTCAAAT

Flanking Amino Acid:

DGRAVVLTSHSMEECEALCT

Intron Amino Acid Position:

1785

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

61.3

43.5

Major BPS

64.9

0.37

1.1

70.9

31.9

Major PPT

64.5

0.33

1.2

66.9

38.6

Minor 5ss

30.9

-2.2

3.4

43.1

44.1

Minor BPS

52.6

0.16

2.1

78.71

42.9

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021728

1332433 - 1381846

49414

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414