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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1333994_1335271_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1333994 - 1335271

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

ATTTCACTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TTTTCTTAAACT

Flanking Amino Acid:

LIGCPPLILLDEPTTGMDPQ

Intron Amino Acid Position:

1751

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

75.1

33.1

Major BPS

82.2

0.8

71.9

35.8

Major PPT

80.7

0.69

0.9

71.1

39.3

Minor 5ss

39.1

-1.2

3.3

54.2

38.3

Minor BPS

79.4

1.5

95.57

31.2

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021728

1332433 - 1381846

49414

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414