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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1335407_1335972_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1335407 - 1335972

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAAGCAT

5'SS Class:

major

3'SS Sequence:

TTCTTTCTCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TCTTTCTCATAG

Flanking Amino Acid:

RGVPAEEIKRVAEWGIQKLG

Intron Amino Acid Position:

1706

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

62.9

43.2

Major BPS

81.9

0.79

0.8

81.9

Major PPT

83.5

0.75

0.7

80.1

25.5

Minor 5ss

31.3

-2.1

3.5

38.6

46.6

Minor BPS

47.4

-0.3

1.9

56.29

45.1

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021728

1332433 - 1381846

49414

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414