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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1337167_1337286_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1337167 - 1337286

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATAATTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

CATTTTATAATT

Flanking Amino Acid:

RLCVGIRPGECFGLLGVNGA

Intron Amino Acid Position:

1623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

80.9

0.7

0.9

79.1

38.1

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

58.1

0.33

1.6

73.1

38.4

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021728

1332433 - 1381846

49414

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414