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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1340184_1341107_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1340184 - 1341107

Intron Length:

924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

CTGTTCCTTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TGTTCCTTATAG

Flanking Amino Acid:

FILELFENNPTLLKFNKTLK

Intron Amino Acid Position:

1477

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

84.6

0.86

41.2

Major PPT

78.5

0.64

0.8

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

63.4

0.28

1.8

69.79

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414

ENSAPLT00000021728

1332433 - 1381846

49414