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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1345645_1345755_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1345645 - 1345755

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGCAAG

5'SS Class:

major

3'SS Sequence:

TTTTTTATTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATTT

Flanking Amino Acid:

DLCRMMNVTGGQTSLAAAKE

Intron Amino Acid Position:

1248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

62.5

43.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.7

0.74

88.1

27.9

Minor 5ss

-1.1

2.8

45.2

43.7

Minor BPS

64.2

0.52

1.5

78.46

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021728

1332433 - 1381846

49414

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414