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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1345862_1347003_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1345862 - 1347003

Intron Length:

1142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTGTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TGGCTGATAATA

Flanking Amino Acid:

LKSKYWVNEQRYGGISIGGK

Intron Amino Acid Position:

1212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

81.9

0.72

0.9

84.5

30.4

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

43.1

-0.5

2.2

53.88

38.8

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021728

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414