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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1345862_1347899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1345862 - 1347899

Intron Length:

2038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCACG

5'SS Class:

major

3'SS Sequence:

TTCTTTTTGTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TGGCTGATAATA

Flanking Amino Acid:

VKTYPVLIKGRYGGISIGGK

Intron Amino Acid Position:

1201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

66.3

45.2

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

81.9

0.72

0.9

84.5

30.4

Minor 5ss

38.3

-1.3

3.1

Minor BPS

43.1

-0.5

2.2

53.88

38.8

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018229

1332433 - 1381846

49414