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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1347037_1347899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1347037 - 1347899

Intron Length:

863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCACG

5'SS Class:

major

3'SS Sequence:

TTGTCTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAG

U12 Branch Point Sequence:

AGTGCGTTAAGA

Flanking Amino Acid:

VKTYPVLIKGSLKSKYWVNE

Intron Amino Acid Position:

1201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

66.3

45.2

Major BPS

47.4

-0.1

1.6

49.1

44.8

Major PPT

89.8

0.89

0.7

88.4

28.7

Minor 5ss

38.3

-1.3

3.1

Minor BPS

47.5

-0.1

2.4

62.1

44.1

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008436

1332433 - 1381846

49414

ENSAPLT00000021728

1332433 - 1381846

49414