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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1347995_1349663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1347995 - 1349663

Intron Length:

1669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGTCC

5'SS Class:

major

3'SS Sequence:

CCTTTCTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TTTACTGTGACT

Flanking Amino Acid:

PGAGGLPPPQRVQHSTEILQ

Intron Amino Acid Position:

1170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

60.3

39.6

Major BPS

0.57

73.6

28.6

Major PPT

84.1

0.77

0.7

26.6

Minor 5ss

36.7

-1.5

3.5

50.9

45.8

Minor BPS

59.2

0.37

2.1

83.66

37.6

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414

ENSAPLT00000021728

1332433 - 1381846

49414