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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1349854_1350912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1349854 - 1350912

Intron Length:

1059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

TTCCTCTACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAA

U12 Branch Point Sequence:

TCTTCCTCTACA

Flanking Amino Acid:

GNRCLKNQPLPNYSCNNMAT

Intron Amino Acid Position:

1106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.3

64.4

42.8

Major BPS

61.3

0.28

1.1

61.7

34.1

Major PPT

76.8

0.6

0.8

72.3

31.4

Minor 5ss

42.4

-0.8

2.8

57.2

40.7

Minor BPS

63.3

0.41

1.9

75.86

41.2

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414