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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1349854_1352368_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1349854 - 1352368

Intron Length:

2515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAA

U12 Branch Point Sequence:

TCTTCCTCTACA

Flanking Amino Acid:

WIYGQQFTFFRNYSCNNMAT

Intron Amino Acid Position:

1073

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

61.3

0.28

1.1

61.7

34.1

Major PPT

76.8

0.6

0.8

72.3

31.4

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

63.3

0.41

1.9

75.86

41.2

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021728

1332433 - 1381846

49414