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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1351012_1352368_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1351012 - 1352368

Intron Length:

1357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CCTATTCCCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ACTTTTTTACTA

Flanking Amino Acid:

WIYGQQFTFFSNERPGSEQM

Intron Amino Acid Position:

1073

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

71.7

0.49

0.8

69.7

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

56.8

0.21

1.5

64.17

37.3

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414