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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1352494_1352916_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1352494 - 1352916

Intron Length:

423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGACT

5'SS Class:

major

3'SS Sequence:

ATGTCCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TATGTCTTAGTG

Flanking Amino Acid:

SRSHKDFLAQIVLPASFVLL

Intron Amino Acid Position:

1032

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

70.6

Major BPS

100

1.24

0.5

100

Major PPT

0.61

0.9

70.5

35.6

Minor 5ss

41.1

-1

3.1

58.6

45.6

Minor BPS

53.6

-0

1.7

59.77

42.7

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414

ENSAPLT00000021728

1332433 - 1381846

49414