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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1354370_1354943_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1354370 - 1354943

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TGACTTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

GCTGTTTTGACT

Flanking Amino Acid:

KEGTQVQELDGDLNELAEVI

Intron Amino Acid Position:

866

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

77.2

37.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

77.4

0.62

0.9

71.9

37.8

Minor 5ss

35.3

-1.7

3.1

46.5

42.9

Minor BPS

59.1

0.37

1.4

70.47

41.3

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021728

1332433 - 1381846

49414

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414