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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1360156_1362727_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1360156 - 1362727

Intron Length:

2572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGGAGA

5'SS Class:

major

3'SS Sequence:

CTTGCCTTTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCATTCTTAATT

Flanking Amino Acid:

TDVQDKDEMNINTFCEPEPT

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

65.1

40.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

70.4

0.46

67.6

38.1

Minor 5ss

33.5

-1.9

3.2

41.2

40.4

Minor BPS

78.1

0.96

1.1

84.08

37.1

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021728

1332433 - 1381846

49414

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414