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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1367057_1368986_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1367057 - 1368986

Intron Length:

1930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ACCTTCTTATTT

Flanking Amino Acid:

LSWYLDNVFPGDYGLPQPWY

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

75.9

35.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

85.3

0.79

0.7

78.4

35.6

Minor 5ss

39.6

-1.2

2.8

49.3

46.9

Minor BPS

58.2

0.33

1.6

69.06

42.8

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021728

1332433 - 1381846

49414

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414