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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1372617_1374752_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1372617 - 1374752

Intron Length:

2136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTAAG

5'SS Class:

major

3'SS Sequence:

CTTGCTTTGGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATCATCT

Flanking Amino Acid:

QMPYPCFVDDVFMITLNRSF

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

71.6

0.49

69.1

Minor 5ss

31.6

-2.1

2.7

34.2

41.4

Minor BPS

53.8

0.2

2.1

79.26

42.1

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008436

1332433 - 1381846

49414

ENSAPLT00000021728

1332433 - 1381846

49414

ENSAPLT00000018229

1332433 - 1381846

49414