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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1374930_1375756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1374930 - 1375756

Intron Length:

827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TTTACCCAAATT

Flanking Amino Acid:

AVEKTNKIKDRYWDPGPRAD

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

68.1

0.45

58.1

38.5

Major PPT

0.83

0.7

85.9

27.9

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

56.3

0.27

81.49

40.2

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021728

1332433 - 1381846

49414

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414