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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1380596_1381789_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1380596 - 1381789

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

GCATTCTAAACA

Flanking Amino Acid:

SPSVRQILKNANSTFEELER

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

82.8

29.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

86.1

0.81

0.7

84.9

29.9

Minor 5ss

37.6

-1.4

3.1

54.1

Minor BPS

58.3

0.26

1.7

64.26

42.1

Associated Gene:

Gene:

ABCA4

Ensembl Gene ID:

ENSAPLG00000007981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021728

1332433 - 1381846

49414

ENSAPLT00000018229

1332433 - 1381846

49414

ENSAPLT00000008436

1332433 - 1381846

49414