Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_1421192_1421731_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1421192 - 1421731

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTTACT

5'SS Class:

major

3'SS Sequence:

ATCTTTCTAAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TCTTTCTAAAAG

Flanking Amino Acid:

KRSSSSTDIQAIRGPPPFRS

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

77.3

37.6

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

66.4

0.37

1.1

68.4

35.9

Minor 5ss

-1.5

52.4

44.2

Minor BPS

56.4

0.06

1.9

63.72

44.3

Associated Gene:

Gene:

ARHGAP29

Ensembl Gene ID:

ENSAPLG00000008546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008930

1413595 - 1469447

55853