Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_1423860_1426017_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1423860 - 1426017

Intron Length:

2158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

CTCCTCCTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

CTCCTCCTAACA

Flanking Amino Acid:

IFQCDLTLKAATVNLFQLQH

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

71.6

0.54

33.1

Major PPT

73.9

0.54

0.9

69.1

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

54.6

0.14

1.7

64.87

41.6

Associated Gene:

Gene:

ARHGAP29

Ensembl Gene ID:

ENSAPLG00000008546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008930

1413595 - 1469447

55853