Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_14423998_14424476_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14423998 - 14424476

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TAATTTTTATTC

Flanking Amino Acid:

RDTIMRYVLTSRSHLIDSPP

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

80.1

34.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.3

0.86

0.7

80.7

31.3

Minor 5ss

41.3

-1

2.8

52.2

44.4

Minor BPS

56.5

0.18

1.5

63.53

36.4

Associated Gene:

Gene:

PTGS2

Ensembl Gene ID:

ENSAPLG00000013877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014480

14422955 - 14428422

5468