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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14559351_14559906_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14559351 - 14559906

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGAATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TATTTCTGAATT

Flanking Amino Acid:

LSAKLEQAMKEIQRLQEVAD

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

88.3

26.6

Major BPS

79.2

0.73

75.3

39.4

Major PPT

77.3

0.61

0.9

70.5

38.9

Minor 5ss

35.7

-1.6

2.6

43.1

43.8

Minor BPS

73.3

0.81

1.3

85.85

33.8

Associated Gene:

Gene:

TPR

Ensembl Gene ID:

ENSAPLG00000012730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023564

14549216 - 14591565

42350

ENSAPLT00000013371

14549216 - 14592471

43256