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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14560725_14561380_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14560725 - 14561380

Intron Length:

656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAATTAT

5'SS Class:

major

3'SS Sequence:

GTCTTGGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TACTACTAAAAA

Flanking Amino Acid:

EKEEQETTSSKISELQSQLE

Intron Amino Acid Position:

611

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

80.1

28.2

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

76.2

0.59

72.5

42.4

Minor 5ss

42.9

-0.8

57.8

41.2

Minor BPS

49.5

-0

1.9

62.89

42.8

Associated Gene:

Gene:

TPR

Ensembl Gene ID:

ENSAPLG00000012730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023564

14549216 - 14591565

42350

ENSAPLT00000013371

14549216 - 14592471

43256