Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_14575170_14575704_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14575170 - 14575704

Intron Length:

535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAAAT

5'SS Class:

major

3'SS Sequence:

TCTTACATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TCATATTTACAT

Flanking Amino Acid:

RDEPPESTNKVPEQQRQISL

Intron Amino Acid Position:

1678

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

74.2

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

76.4

0.59

0.8

70.8

34.3

Minor 5ss

33.4

-1.9

3.3

48.6

47.1

Minor BPS

48.6

-0

1.9

66.73

43.8

Associated Gene:

Gene:

TPR

Ensembl Gene ID:

ENSAPLG00000012730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023564

14549216 - 14591565

42350

ENSAPLT00000013371

14549216 - 14592471

43256