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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14575767_14576704_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14575767 - 14576704

Intron Length:

938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CCATCATGAATC

Flanking Amino Acid:

KSTPASGERGIASTSDPPTA

Intron Amino Acid Position:

1698

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

78.4

25.8

Major BPS

73.1

0.58

79.6

29.1

Major PPT

0.74

0.8

80.2

31.8

Minor 5ss

36.5

-1.5

2.9

44.6

43.6

Minor BPS

49.4

-0

1.7

57.19

41.5

Associated Gene:

Gene:

TPR

Ensembl Gene ID:

ENSAPLG00000012730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023564

14549216 - 14591565

42350

ENSAPLT00000013371

14549216 - 14592471

43256