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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14580777_14582085_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14580777 - 14582085

Intron Length:

1309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

GATACTATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTTCCCGAATG

Flanking Amino Acid:

DDEENEGEQEDYEDEEEEDE

Intron Amino Acid Position:

2004

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

82.5

29.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.45

59.2

45.6

Minor 5ss

47.1

-0.3

2.5

59.7

39.1

Minor BPS

55.7

0.04

1.9

66.25

41.2

Associated Gene:

Gene:

TPR

Ensembl Gene ID:

ENSAPLG00000012730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023564

14549216 - 14591565

42350

ENSAPLT00000013371

14549216 - 14592471

43256