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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14588336_14588956_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14588336 - 14588956

Intron Length:

621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTGTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

GTTTATTGAACT

Flanking Amino Acid:

PTTPLQVAAPVTVFTESTSA

Intron Amino Acid Position:

2262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.3

1.04

0.8

79.7

35.4

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

0.7

0.9

75.9

32.7

Minor 5ss

-1.9

3.2

43.9

Minor BPS

65.1

0.55

1.6

82.98

37.5

Associated Gene:

Gene:

TPR

Ensembl Gene ID:

ENSAPLG00000012730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023564

14549216 - 14591565

42350

ENSAPLT00000013371

14549216 - 14592471

43256