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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14592780_14593792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14592780 - 14593792

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTAG

5'SS Class:

major

3'SS Sequence:

ATCTTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTAATTTTGACA

Flanking Amino Acid:

DGYDYYAFSYNRYYSLDVGK

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

38.5

Major BPS

90.7

1.01

0.7

19.9

Major PPT

81.4

0.71

0.8

78.3

34.1

Minor 5ss

41.7

-0.9

2.8

54.8

43.4

Minor BPS

64.1

0.44

1.2

71.07

34.6

Associated Gene:

Gene:

PRG4

Ensembl Gene ID:

ENSAPLG00000012642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033480

14592676 - 14608711

16036

ENSAPLT00000013172

14592676 - 14606627

13952