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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14595301_14595862_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14595301 - 14595862

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGGAAG

5'SS Class:

major

3'SS Sequence:

CTTAAACCACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTTTGCTTAAAC

Flanking Amino Acid:

NCDGKTFFIKGNLYWRFTNG

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

65.6

41.7

Major BPS

82.1

0.8

71.6

36.4

Major PPT

58.3

0.19

49.6

39.1

Minor 5ss

24.8

-2.9

3.1

29.2

43.7

Minor BPS

71.6

0.66

1.8

83.76

35.4

Associated Gene:

Gene:

PRG4

Ensembl Gene ID:

ENSAPLG00000012642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033480

14592676 - 14608711

16036

ENSAPLT00000013172

14592676 - 14606627

13952