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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14604347_14606473_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14604347 - 14606473

Intron Length:

2127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTAATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TCTGCCTTAATG

Flanking Amino Acid:

CADFKKVCTVAVSCKGRCFE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

Major BPS

76.8

0.67

0.9

75.9

Major PPT

67.7

0.4

0.9

37.3

Minor 5ss

-1

2.7

45.9

42.3

Minor BPS

72.2

0.56

1.5

70.75

43.1

Associated Gene:

Gene:

PRG4

Ensembl Gene ID:

ENSAPLG00000012642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033480

14592676 - 14608711

16036

ENSAPLT00000013172

14592676 - 14606627

13952