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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14639659_14640258_R

Intron Information:

Intron Rank:

106

Intron Class:

major

Intron Phase:

Intron Coordinates:

14639659 - 14640258

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAAAG

5'SS Class:

major

3'SS Sequence:

TTGTGACCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

TTTTTTGTGACC

Flanking Amino Acid:

RLTPNGKTCQDIDECLEQNI

Intron Amino Acid Position:

5437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

65.1

40.7

Major BPS

0.47

1.2

69.9

35.3

Major PPT

75.3

0.57

0.9

71.1

39.9

Minor 5ss

31.1

-2.2

3.2

39.5

Minor BPS

58.7

0.25

76.51

34.1

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343

ENSAPLT00000047505

14638056 - 14826313

188258