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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14643046_14647096_R

Intron Information:

Intron Rank:

104

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14643046 - 14647096

Intron Length:

4051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

GTCACATGAGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCACAT

U12 Branch Point Sequence:

TTGCTCTGGATC

Flanking Amino Acid:

RSQGVGRPCVDINECEQVPK

Intron Amino Acid Position:

5280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.7

43.7

Major BPS

65.1

0.38

1.1

71.2

35.2

Major PPT

0.16

1.1

51.4

41.7

Minor 5ss

45.1

-0.5

2.9

56.3

47.9

Minor BPS

52.4

0.06

1.4

63.1

36.7

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343

ENSAPLT00000047505

14638056 - 14826313

188258