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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14650923_14651051_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14650923 - 14651051

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTTC

5'SS Class:

major

3'SS Sequence:

CTTTACCATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTCCTTTACCA

Flanking Amino Acid:

AFKIHASIAKGDRSNQCPAG

Intron Amino Acid Position:

5051

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

68.4

37.2

Major BPS

100

1.24

0.5

100

Major PPT

72.4

0.5

0.9

67.1

Minor 5ss

47.4

-0.2

67.5

43.9

Minor BPS

65.3

0.48

1.6

75.1

36.2

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047505

14638056 - 14826313

188258

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343