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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14653350_14653679_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14653350 - 14653679

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGCTTT

5'SS Class:

major

3'SS Sequence:

GGATTTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TTATATTGGATT

Flanking Amino Acid:

AKITNIPQSLGPAIRKLVSI

Intron Amino Acid Position:

4885

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

71.5

41.1

Major BPS

72.5

0.56

1.2

63.4

Major PPT

77.4

0.62

0.9

73.7

41.5

Minor 5ss

48.5

-0.1

3.2

69.4

43.7

Minor BPS

52.1

0.15

1.6

73.25

37.7

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343

ENSAPLT00000047505

14638056 - 14826313

188258