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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14653830_14654259_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14653830 - 14654259

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGGCAC

U12 Branch Point Sequence:

CTCCCCTGCACA

Flanking Amino Acid:

ISRCNVQACPGGPSRAKGSI

Intron Amino Acid Position:

4835

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

80.2

30.7

Major BPS

46.5

-0.2

1.4

54.8

42.1

Major PPT

68.9

0.43

0.9

63.4

31.5

Minor 5ss

34.1

-1.8

2.8

40.8

45.4

Minor BPS

48.9

-0

61.44

44.5

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047505

14638056 - 14826313

188258

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343