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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14654411_14658561_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14654411 - 14658561

Intron Length:

4151

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCCACGTGG

5'SS Class:

weak_major

3'SS Sequence:

AAACTGGGGTCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

CTTTCTTCAAGT

Flanking Amino Acid:

TRQTSLDGKWWQTWSQCSAS

Intron Amino Acid Position:

4743

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.4

43.4

43.9

Major BPS

78.2

0.7

79.9

32.6

Major PPT

48.4

-0

1.2

46.5

Minor 5ss

26.3

-2.7

29.6

43.2

Minor BPS

0.42

1.9

79.65

42.8

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047505

14638056 - 14826313

188258