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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14654431_14657557_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14654431 - 14657557

Intron Length:

3127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCCTCATTC

Flanking Amino Acid:

IQRCSTELCPVDGNWGQWQT

Intron Amino Acid Position:

4778

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.9

0.67

79.2

33.2

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

64.9

0.45

1.8

78.68

37.2

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343