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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14658576_14659761_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

14658576 - 14659761

Intron Length:

1186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTTTCCATA

5'SS Class:

weak_minor

3'SS Sequence:

CCTTTCTAACCAG|T

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TTTCTAA

U12 Branch Point Sequence:

GTGACTGTAACT

Flanking Amino Acid:

QIQRETRQTSLDGKWWQTWS

Intron Amino Acid Position:

4738

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

45.6

-0.2

1.3

48.4

41.6

Major BPS

64.6

0.36

1.3

64.8

42.4

Major PPT

72.6

0.51

66.7

38.5

Minor 5ss

62.4

0.42

73.1

37.5

Minor BPS

53.5

0.19

2.1

73.14

43.8

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047505

14638056 - 14826313

188258