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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14662483_14663389_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14662483 - 14663389

Intron Length:

907

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGACTC

5'SS Class:

major

3'SS Sequence:

ACTTCTCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

CTTCTCTTCAAG

Flanking Amino Acid:

VERSLTLTLQSPPVITIEPA

Intron Amino Acid Position:

4438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

63.6

41.3

Major BPS

0.1

59.7

32.6

Major PPT

70.9

0.47

68.3

37.2

Minor 5ss

37.8

-1.4

3.2

48.4

41.4

Minor BPS

48.3

-0.2

57.38

44.1

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047505

14638056 - 14826313

188258

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343