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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14664735_14665267_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14664735 - 14665267

Intron Length:

533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAAAC

5'SS Class:

major

3'SS Sequence:

GTTCTCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

AATCATTGAAGT

Flanking Amino Acid:

TWTFNNNIIPAQYDDVNGHS

Intron Amino Acid Position:

4302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

71.2

34.5

Major BPS

73.1

0.58

79.6

29.1

Major PPT

84.5

0.78

0.8

81.3

30.7

Minor 5ss

26.9

-2.6

33.2

42.3

Minor BPS

46.1

-0.2

1.8

63.28

40.3

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343

ENSAPLT00000047505

14638056 - 14826313

188258